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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951896.1_cds_XP_016491800.1_82080
CDS Infomation

[gene=LOC107811392] [db_xref=GeneID:107811392] [protein=betaine aldehyde dehydrogenase, chloroplastic-like isoform X2] [protein_id=XP_016491800.1] [location=complement(join(70805..70895,71226..71332,71445..71505,71585..71736,71820..71897,72112..72225,72918..72994,73093..73162,73265..73330,73415..73538,73623..73715,76069..76217,80157..80290,80789..80906))] [gbkey=CDS]
Sequence

ATGGCAATTCCAAACGTACGTATTCCCAGCCGACAGCTATACATCGACGGTGAATGGAGA
GAACCAGTCAAGAAGAACAGAATACCTATAATCAGTCCGGCTACTGAAGAAATTATCGGG
GAAATACCGGCTGCTACTGAGGAAGATGTGGATATAGCTGTGGAAGCTGCTCGGAGAGCG
CTAGCTCGGGATGACTGGGGCTCAACAACAGGGGCACAGCGCGCAAAATATCTTCGTGCT
ATTGCTGCTAAGGATGATGTCGCAGCAAGTTTTGAGTACTACGCAGACCTCGCTGAAGCT
CTGGATTCAAAAAGGAAAACTCCAGTTGATCTCCATCTGGATTCATTTAAGACTTATGTT
CTTAGAGAACCTCTTGGTGTAGTTGGATTGATAACTCCATGGAATTATCCACTGTTAATG
GCCACATGGAAAGTTGCCCCTGCCCTGGCTGCTGGTTGTGCAGCAATACTTAAGCCGTCT
GAACTAGCATCTATAACCTGTTTGGAGTTGGGTGAGATCTGTAGAGAGGTGGGCCTCCCT
CCTGGTGCTCTAAACATTTTAACAGGATTGGGGCCTGAAGCTGGTGCTCCTTTGGTATCT
CATCCTCATGTTGACAAGATTGCATTTACAGGAAATGGCGCCACAGGAGTTAAGATCATG
ACTGCTGCAGCTCAACTTGTTAAACCAGTTACTCTTGAGCTTGGTGGAAAAAGTCCAATA
GTGGTGTTTGATGACATTGATAACCTTGATCTAGCTGTTGAGTGGACTCTTTTTGGTTGC
TTTGCAAATGCTGGTCAAGTTTGCAGTGCAACATCACGTCTTATACTACAGGAAAGCATT
GCTTCTGAATTTTTGGAGAGGCTGCTTCTCTGGATAAAAAATATCAAAATCTCAGATCCT
TTGGAAGAAGATTGCAAGCTTGGTCCCATCGTTAGTTCTGGACAGTATGAGAAGGTATTG
AAGTTCATCTCAAAAGCCAAAGATGAAGGTGCAACCATTTTATGTGGTGGCGAAAGGCCT
CAGCATATGAAGAAAGGATATTATGTTCAACCAACAATTATTACTGATGTTAATACCTCC
ATGGAAATCTGGAAAGAGGAAGTATTCGGACCTGTTCTTTGTGTCAAAACATTCAAAACT
GAAGAGGAAGCCATTGAACTAGCAAATGACACCAAGTATGGTTTGGCTTCTGCTATTATG
TCAAAAGATGTTGAAAGGTGTGAGCGTTTCACAAAGGCTTTTCAGACAGGGATCATCTGG
TTCAACTGTTCACAGCCAACCTTTACGCAGCTTCCATGGGGTGGTAGAAAGCGTAGTGGT
TTTGGACGCGATCTAGGGGAATGGGGTCTTGAGAACTACTTGAACATTAAGCAGGTGACG
CAGTATACTTCTGTTGAACCATGGGCTTTTTACAAGTCACCTTCAAAGGTGTGA

Peptide Sequence

PEP ID

XP_016491800.1
PEP Infomation

PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MAIPNVRIPSRQLYIDGEWREPVKKNRIPIISPATEEIIGEIPAATEEDVDIAVEAARRA
LARDDWGSTTGAQRAKYLRAIAAKDDVAASFEYYADLAEALDSKRKTPVDLHLDSFKTYV
LREPLGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASITCLELGEICREVGLP
PGALNILTGLGPEAGAPLVSHPHVDKIAFTGNGATGVKIMTAAAQLVKPVTLELGGKSPI
VVFDDIDNLDLAVEWTLFGCFANAGQVCSATSRLILQESIASEFLERLLLWIKNIKISDP
LEEDCKLGPIVSSGQYEKVLKFISKAKDEGATILCGGERPQHMKKGYYVQPTIITDVNTS
MEIWKEEVFGPVLCVKTFKTEEEAIELANDTKYGLASAIMSKDVERCERFTKAFQTGIIW
FNCSQPTFTQLPWGGRKRSGFGRDLGEWGLENYLNIKQVTQYTSVEPWAFYKSPSKV

Transcript Sequence

Gene sequence data has not been registered.